rs4452769 chr8:129696087 C>G

Sequence
aaggcaaaagacaatgaggataga[C/G]atatggcaatggatcaagagtcac
ASB in cell types
K562 (myelogenous leukemia) TTC-1240 (Rhabdoid tumor of the kidney) A549 (lung carcinoma)
ASB for transcription factors
SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 1.12 -0.02 0.030.96 1.25 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration bipolar disorder height major depressive disorder rheumatoid arthritis
GTEx eQTL Esophagus_Mucosa Heart_Atrial_Appendage Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen

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