rs4456673 chr2:12167674 C>A
- Sequence
ctgcctgcacaggccgtctagcac[C/A]gtctcctgacgacctcagagggct
- ASB in cell types
- bipolar neuron IPSC-derived bipolar neuron tibial nerve WA09 (embryonic stem cells)
- ASB for transcription factors
- STAG1_HUMAN RAD21_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.41 | 0.48 | 1.03 | n/a | n/a | |||
| RAD21_HUMAN | 1.12 | -0.63 | 1.83 | n/a | n/a | |||
| CTCF_HUMAN | 1.25 | 0.50 | 1.41 | -3.59 | Concordant |
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Motif analysis
