rs4461456 chr3:32443638 C>T

Sequence
tttgtgtttaattgtttgaggaac[C/T]gccagactgtatgccaaagtggct
ASB in cell types
monocyte-derived dendritic cells HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 2.45 n/a 0.041.00 4.00 0.36 Weak Discordant
SPI1_HUMAN 0.79 1.99 1.000.04 1.88 2.49 Concordant
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Motif analysis

TF65_HUMAN Weak Discordant
TF65_HUMAN pic

Genetic associations

GRASP 2 hour glucose fasting blood glucose fasting insulin homa-ir ldl cholesterol total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts Thyroid

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