rs4464815 chr6:156416590 A>G
- Sequence
tgcagagggctgtataagccacca[A/G]gaggagtctggcttttattccaag
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) upper lobe of left lung GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -3.60 | 3.34 | 1.00 | 3.67 | Concordant | |||
| STAG1_HUMAN | -2.66 | 2.57 | 1.00 | n/a | n/a |
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Motif analysis
