ADASTRA v6.1.0
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rs4465
chr22:35312797
C
>
T
Sequence
gccacatagaggaagggggtacag[C/T]tgactgtggctgacgccagcccct
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
MEF2B_HUMAN
IKZF1_HUMAN
IKZF2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN
2.83
-2.70
1.6·10
-3
1.00
1.00
n/a
No Hit
IKZF1_HUMAN
1.74
0.01
0.03
1.00
1.44
n/a
n/a
IKZF2_HUMAN
1.56
-0.81
0.03
1.00
1.00
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Artery_Coronary
,
Artery_Tibial
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
,
Pituitary
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)