ADASTRA v6.1.1
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rs4467218
chr2:127025700
G
>
C
Sequence
gttctcactctgcagccgcagcca[G/C]tggcgccgctaccaaggtccccgc
ASB in cell types
GBM39 (Human brain tumor)
ASB for transcription factors
CTCF_HUMAN
SMC3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
1.16
0.53
7.0·10
-4
1.00
1.20
n/a
No Hit
SMC3_HUMAN
1.81
-0.95
4.8·10
-3
1.00
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
aortic valve calcium
,
cystatin c in serum
,
homa-ir
,
ldl cholesterol
,
years of education
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Brain_Spinal_cord_cervical_c-1
,
Pituitary
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)