rs4470441 chr3:149480401 C>T
- Sequence
tttaataatgagaccaaaggtaga[C/T]tgatgaggatatgtgttgggtagg
- ASB in cell types
- A549 (lung carcinoma) GM02610 (Lymphoblastoid Cell Lines) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.29 | 1.00 | 1.25 | n/a | No Hit | |||
| SMC3_HUMAN | 0.21 | 1.48 | 1.96 | n/a | n/a | |||
| RAD21_HUMAN | 0.34 | 1.12 | 1.75 | n/a | n/a |
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