rs4472810 chr1:202106361 A>G
- Sequence
ggggtgttctgagttggccctgtc[A/G]tggccctaatctgtccttccccca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- REQU_HUMAN ARI1B_HUMAN PKNX1_HUMAN SMCE1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REQU_HUMAN | 1.98 | n/a | 3.00 | n/a | n/a | |||
| ARI1B_HUMAN | 1.20 | n/a | 3.00 | n/a | n/a | |||
| PKNX1_HUMAN | 3.05 | n/a | 3.00 | -2.16 | Concordant | |||
| SMCE1_HUMAN | 2.09 | n/a | 3.00 | n/a | n/a | |||
| KDM1A_HUMAN | 1.67 | -0.77 | 3.00 | n/a | n/a |
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Motif analysis
