rs4488008 chr1:168643336 G>A
- Sequence
tcagtggggtcagttgcagtgacc[G/A]cacatcatgacgtggcctgtagac
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) MDA-MB-231ERb(triple negative breast cancer)
- ASB for transcription factors
- JUN_HUMAN ESR2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -3.55 | 2.22 | 1.33 | n/a | No Hit | |||
| ESR2_HUMAN | 2.46 | -0.77 | 2.00 | -0.25 | Weak Concordant |
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Motif analysis
