rs45498201 chr2:31385052 G>A
- Sequence
caactgggcccaggacattggatg[G/A]ctcatggcagggagcatgcaagtg
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- JUN_HUMAN JUNB_HUMAN GCR_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.20 | 2.55 | 1.00 | 6.07 | Concordant | |||
| JUNB_HUMAN | 0.16 | 2.76 | 1.32 | 4.64 | Concordant | |||
| GCR_HUMAN | -0.40 | 1.84 | 1.27 | n/a | No Hit | |||
| EP300_HUMAN | 0.26 | 2.07 | 1.37 | n/a | n/a | |||
| BCL3_HUMAN | -0.06 | 2.08 | 1.07 | n/a | n/a |
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Motif analysis
