rs45523237 chr2:134918246 G>A
- Sequence
ccgcgcgctaggcggagactgttg[G/A]tggcggaggccggagtcgcacgcc
- ASB in cell types
- CD14+ monocytes 22RV1 (prostate carcinoma) HKC8 (kidney proximal tubule cell line)
- ASB for transcription factors
- STAT1_HUMAN ANDR_HUMAN CTCF_HUMAN E2F8_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.18 | -1.08 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 3.06 | n/a | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.96 | 0.35 | 1.20 | -0.67 | Weak Concordant | |||
| E2F8_HUMAN | -2.34 | 2.45 | 1.00 | n/a | No Hit |
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Motif analysis
