rs45524837 chr6:36547263 G>C

Sequence
cccttcggccagtagtctcgactt[G/C]aaggctggcgaagccccggcggcg
ASB in cell types
22RV1 (prostate carcinoma) HepG2 (hepatoblastoma) GM17942 (lymphoblastoid cell)
ASB for transcription factors
TYY1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN 2.19 -0.78 7.0·10-31.00 2.00 n/a No Hit
ANDR_HUMAN 2.67 -4.89 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Esophagus_Mucosa,  Lung,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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