rs45560234 chr11:73982793 G>A
- Sequence
ggcggagggcgcgtcggacgagcc[G/A]ggcgagcgtggacagtcaatccca
- ASB in cell types
- HEK293 (embryonic kidney) monocytes from periferal blood
- ASB for transcription factors
- TYY1_HUMAN SRBP2_HUMAN KLF8_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 1.79 | -1.31 | 1.80 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.98 | n/a | 3.00 | n/a | No Hit | |||
| KLF8_HUMAN | -1.91 | 2.40 | 1.00 | -0.95 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood