rs45583140 chr10:71812008 T>C
- Sequence
atgcctaacaccaacaagtactcc[T/C]ttgatgggtgagtggggtactggc
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma) PC9 (lung adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.99 | 0.12 | 1.23 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Nerve_Tibial, Spleen, Thyroid, Whole_Blood