rs4601 chr17:41525223 A>G
- Sequence
gaagtcatctgcagccagacgggc[A/G]ttgtcgatctgcaggacaatcctg
- ASB in cell types
- HCT-116 (colon carcinoma)
- ASB for transcription factors
- SPT6H_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPT6H_HUMAN | 2.19 | -2.07 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Esophagus_Mucosa, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid