rs4627352 chr16:2520372 T>C
- Sequence
cagctgaaggtcacgtgggcgcgg[T/C]ctcagctctcggctggggttcgtc
- ASB in cell types
- HeLa (cervical adenocarcinoma)
- ASB for transcription factors
- INT11_HUMAN CPSF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| INT11_HUMAN | 0.54 | 1.57 | 2.00 | n/a | n/a | |||
| CPSF3_HUMAN | -0.50 | 1.55 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Coronary, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Spleen, Thyroid, Whole_Blood