rs4636445 chr1:26377953 C>A
- Sequence
ctttctttctttctttctttcttt[C/A]tttctttcttgttgtattttggta
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ARNT_HUMAN EP400_HUMAN ZN184_HUMAN ZN512_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARNT_HUMAN | -1.19 | 1.88 | 1.00 | n/a | No Hit | |||
| EP400_HUMAN | -2.29 | 2.68 | 1.00 | n/a | n/a | |||
| ZN184_HUMAN | 3.03 | 1.08 | 1.00 | -0.08 | Weak Concordant | |||
| ZN512_HUMAN | 1.90 | -1.68 | 1.00 | n/a | n/a | |||
| EGR1_HUMAN | -1.81 | 2.20 | 1.00 | n/a | No Hit |
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Motif analysis
