rs4750483 chr10:14185577 G>A
- Sequence
aagactatttaaaggttcaatctc[G/A]tcttgtaagaaagagaaacaggta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MOLT-4 (Adult T acute lymphoblastic leukemia) HeLa (cervical adenocarcinoma) HT29 (colon adenocarcinoma)
- ASB for transcription factors
- SPT5H_HUMAN MBD4_HUMAN TRI22_HUMAN REL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPT5H_HUMAN | 1.36 | 0.14 | 1.00 | n/a | n/a | |||
| MBD4_HUMAN | 1.96 | 0.07 | 1.08 | n/a | n/a | |||
| TRI22_HUMAN | 1.96 | -1.22 | 1.00 | n/a | n/a | |||
| REL_HUMAN | 2.17 | -1.82 | 1.00 | n/a | No Hit | |||
| ELL2_HUMAN | 1.44 | -0.93 | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 5