rs4760389 chr12:92408348 T>G
- Sequence
gagccacaagatggaaggaacttg[T/G]atccctgaatggcatagcctcttc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) pancreas upper lobe of left lung glioblastoma patient-derived cell model
- ASB for transcription factors
- CTCF_HUMAN PKNX1_HUMAN RAD21_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.48 | 0.30 | 1.52 | n/a | No Hit | |||
| PKNX1_HUMAN | -3.77 | 2.31 | 3.00 | n/a | No Hit | |||
| RAD21_HUMAN | 0.86 | 0.13 | 1.38 | n/a | n/a | |||
| STAG1_HUMAN | 0.53 | -0.23 | 1.10 | n/a | n/a |
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