rs4761429 chr12:76559119 G>A

Sequence
aaacttcaggagggacagacaccc[G/A]gggcggtcgaaatgctccaacagc
ASB in cell types
K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) -0.05 0.89 1.002.8·10-4 2.00
GM12878 (female B-cells lymphoblastoid cell line) 0.40 0.70 0.815.1·10-3 1.10
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Motif analysis

No data available

Genetic associations

GRASP abnormal involuntary movement scale hdl cholesterol total cholesterol triglycerides change with statins
GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Frontal_Cortex_BA9 Brain_Nucleus_accumbens_basal_ganglia Heart_Atrial_Appendage Nerve_Tibial Skin_Sun_Exposed_Lower_leg Whole_Blood

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