rs4761854 chr12:52278841 T>C

Sequence
ctgtgacagctccctctgtgcctc[T/C]ccttttgtcgggggctatttcttc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) HEK293 (embryonic kidney)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) 0.18 0.89 1.003.8·10-8 1.40
HEK293 (embryonic kidney) -0.06 0.85 1.005.2·10-6 2.01
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  ldl cholesterol,  total cholesterol
GTEx eQTL Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Spinal_cord_cervical_c-1,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Pancreas,  Thyroid

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