rs4762628 chr12:95820266 C>T
- Sequence
tgccttggaatatccactgggaaa[C/T]ggtgttttcatctctaacagcaca
- ASB in cell types
- T47D (invasive ductal carcinoma) hASC (preadipocytes) LNCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| T47D (invasive ductal carcinoma) | 1.35 | 0.36 | 1.14 | |||
| hASC (preadipocytes) | 0.41 | 2.03 | 1.00 | |||
| LNCaP (prostate carcinoma) | -0.42 | 0.93 | 1.10 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Breast_Mammary_Tissue, Liver, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid