rs4762699 chr12:21351134 T>C

Sequence
ggtgcctaaatgtgtacaaggcac[T/C]atggggaggcactgagtaaataag
ASB in cell types
22RV1 (prostate carcinoma) CWR22 (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 0.21 0.97 1.007.3·10-5 1.58 n/a No Hit
ANDR_HUMAN 0.32 1.48 1.001.1·10-4 1.69 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  age at death with kuru exposure,  chronic kidney disease,  ldl cholesterol,  waist hip ratio

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