rs4763211 chr12:10615587 C>T

Sequence
tgactaaaaaggcaaattgggcca[C/T]gtttccttgagtccatattagtag
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -1.26 3.12 0.994.2·10-4 2.00 n/a No Hit
CTCF_HUMAN -0.09 1.96 0.980.05 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  hdl cholesterol change with statins,  simpson-angus scale
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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