rs4764278 chr12:16636797 T>C
- Sequence
tttaaagacttccatcagtttttt[T/C]ggggggtggtgaggggaagttttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- MEF2B_HUMAN IKZF1_HUMAN RELB_HUMAN TRI22_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | -3.29 | 2.33 | 1.50 | -1.06 | Weak Discordant | |||
| IKZF1_HUMAN | 0.83 | 2.40 | 2.00 | n/a | n/a | |||
| RELB_HUMAN | -1.99 | 2.34 | 1.00 | n/a | No Hit | |||
| TRI22_HUMAN | -2.41 | 2.33 | 1.00 | n/a | n/a | |||
| SKIL_HUMAN | -2.39 | 2.73 | 1.00 | n/a | n/a |
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Motif analysis
