rs4766660 chr12:112838931 A>G

Sequence
tgggtggcttcattctgacccctc[A/G]tggtgcaccagagcaggtgccttc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.64 2.18 1.000.05 1.67 3.76 Concordant
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Motif analysis

CTCF_HUMAN Concordant
CTCF_HUMAN pic

Genetic associations

GRASP alcohol consumption (male) fasting blood glucose hdl cholesterol serum creatinine tardive dyskinesia total cholesterol change with statins
GTEx eQTL Adipose_Visceral_Omentum Lung Spleen Thyroid Whole_Blood

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