rs4766683 chr12:111824304 A>G
- Sequence
aatcctaaggtgaatgggctctgt[A/G]tcccattattaattacacttaatt
- ASB in cell types
- GM18951 (B-cells Lymphoblastoid Cell Lines) GM18526 (B – cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.43 | 1.97 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.73 | 1.92 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Muscularis, Lung, Nerve_Tibial, Stomach