rs4766944 chr12:119627904 T>C

Sequence
accacccctttccagggcaatgac[T/C]cggaagttgtcaccccttttcagg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
GABP1_HUMAN NR2C1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GABP1_HUMAN n/a 3.05 1.001.1·10-5 2.00 n/a n/a
NR2C1_HUMAN n/a 3.52 1.009.9·10-5 2.50 4.40 Concordant
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Motif analysis

NR2C1_HUMAN Concordant
NR2C1_HUMAN pic

Genetic associations

GTEx eQTL Artery_Aorta Esophagus_Muscularis Muscle_Skeletal Testis Thyroid

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