rs4767505 chr12:117155308 T>C
- Sequence
ccagacgcctacccaaccttactg[T/C]acacttgcgggctctcaggtgctc
- ASB in cell types
- K562 (myelogenous leukemia) T47D (invasive ductal carcinoma) transverse colon HMEC (human mammary epithelial cells)
- ASB for transcription factors
- ZN579_HUMAN CTCF_HUMAN JUN_HUMAN GABP1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN579_HUMAN | -2.55 | 2.79 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.50 | 0.94 | 1.34 | -0.50 | Weak Discordant | |||
| JUN_HUMAN | 0.17 | 1.26 | 1.00 | n/a | No Hit | |||
| GABP1_HUMAN | n/a | 2.62 | 2.00 | n/a | n/a |
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Motif analysis
