rs4770489 chr13:23752615 A>G
- Sequence
cttaagttatcttattactcagaa[A/G]tgtgatttaacataagccaaaaac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TBX21_HUMAN IKZF1_HUMAN ZN217_HUMAN BACH1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | -3.45 | 2.31 | 1.50 | 6.28 | Concordant | |||
| IKZF1_HUMAN | -0.91 | 1.95 | 1.25 | n/a | n/a | |||
| ZN217_HUMAN | -2.18 | 2.56 | 1.00 | n/a | n/a | |||
| BACH1_HUMAN | -2.56 | 2.48 | 1.00 | 0.30 | Weak Concordant | |||
| MEF2B_HUMAN | -1.41 | 1.41 | 1.00 | n/a | No Hit |
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Motif analysis
