rs4770960 chr13:26216997 A>G

Sequence
taaataaaatagctattatatgac[A/G]tcattctgatttcatttcattcct
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
ATF2_HUMAN ATF7_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF2_HUMAN 3.25 0.66 2.7·10-41.00 1.00 3.83 Discordant
ATF7_HUMAN 1.89 -0.80 0.041.00 2.17 2.17 Discordant
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Motif analysis

ATF2_HUMAN Discordant
ATF2_HUMAN pic

Genetic associations

GRASP college completion
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Brain_Caudate_basal_ganglia Brain_Cerebellum Brain_Cortex Colon_Sigmoid Esophagus_Mucosa Heart_Atrial_Appendage Heart_Left_Ventricle Muscle_Skeletal

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