rs4770999 chr13:26599762 C>T
- Sequence
tgaaggccttcttgatatctgata[C/T]ttacttcctgtaggtttctttgtg
- ASB in cell types
- renal cortex
- ASB for transcription factors
- SIX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SIX2_HUMAN | 2.74 | -0.18 | 1.17 | -0.92 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Liver, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg