rs4771945 chr13:96399116 A>G

Sequence
tttgtggtaattagctatgcagca[A/G]tagataactaatatacacatcaag
ASB for transcription factors
SATB1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SATB1_HUMAN -2.10 1.76 1.000.04 1.00 -3.49 Discordant
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Motif analysis

SATB1_HUMAN Discordant
SATB1_HUMAN pic

Genetic associations

GRASP body mass index (bmi),  hdl cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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