rs4775025 chr15:58221798 G>C
- Sequence
tcccaactcaggacagctgtgtag[G/C]gccaccacagctctagagtgaccc
- ASB in cell types
- GM18505 (female B-cells Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines) 2588 (Lymphoblastoid Cell Lines) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.51 | 1.08 | 1.30 | n/a | No Hit | |||
| STAG1_HUMAN | -0.05 | 1.25 | 1.00 | n/a | n/a |
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