rs4777428 chr15:71651903 C>T
- Sequence
cttgtggagaaaaatgcaaacagg[C/T]acatttggctgtgtgttaaggaaa
- ASB in cell types
- HAP1 (chronic myelogenous leukemia) GM19193 (female B-cells Lymphoblastoid Cell Lines) glioblastoma cells GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN ELF1_HUMAN ZN660_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.60 | 0.60 | 1.40 | n/a | No Hit | |||
| STAG1_HUMAN | 1.88 | 0.34 | 1.03 | n/a | n/a | |||
| ELF1_HUMAN | 2.90 | n/a | 1.00 | n/a | No Hit | |||
| ZN660_HUMAN | 2.67 | -2.41 | 1.00 | n/a | No Hit |
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