rs4780338 chr16:10937299 C>T
- Sequence
cttcctggcctggtttcctgcatc[C/T]gccctgacccctggctgtgggatc
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.55 | 1.89 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.14 | 1.56 | 1.25 | 0.23 | Weak Concordant |
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Motif analysis
