rs4780464 chr16:12613562 A>G
- Sequence
ctgccctttgaactcaagggctga[A/G]ggacagggaccaagacaggatgct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN PKNX1_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | n/a | 2.12 | 3.00 | n/a | n/a | |||
| PKNX1_HUMAN | -4.24 | 2.47 | 1.50 | 2.96 | Concordant | |||
| IKZF1_HUMAN | n/a | 1.08 | 3.50 | n/a | n/a |
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Motif analysis
