rs4782422 chr16:88688262 G>A
- Sequence
ctgagccaagcctccacccacacc[G/A]tccctccccgcccacctacccgtt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- HTF4_HUMAN TAL1_HUMAN MTA2_HUMAN ILF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HTF4_HUMAN | 1.00 | n/a | 2.00 | n/a | No Hit | |||
| TAL1_HUMAN | 0.88 | -4.52 | 2.40 | n/a | No Hit | |||
| MTA2_HUMAN | 1.87 | n/a | 2.00 | n/a | n/a | |||
| ILF3_HUMAN | 2.33 | -5.02 | 2.50 | n/a | n/a | |||
| SMCE1_HUMAN | 1.45 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood