rs4783439 chr16:22192627 C>T
- Sequence
ttcttcgagcaggaaaaacaatct[C/T]acactgctcacgttattttctaga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) K562 (myelogenous leukemia) Th1-cells
- ASB for transcription factors
- IRF5_HUMAN TBX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IRF5_HUMAN | -1.78 | 2.24 | 1.00 | n/a | No Hit | |||
| TBX21_HUMAN | 1.79 | -1.61 | 1.00 | -2.82 | Concordant |
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Motif analysis
