rs4783683 chr16:68782825 T>C
- Sequence
ttccttcccatccttgcccctccg[T/C]ccctggaccagctccatgggtcag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.71 | 0.32 | 1.15 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Caudate_basal_ganglia, Brain_Putamen_basal_ganglia, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Spleen, Testis, Whole_Blood