rs4783818 chr16:53704371 A>T

Sequence
gccttgtcagcaagggacctggag[A/T]tattagaggggatgttacaaattc
ASB in cell types
LNCaP C4-2B (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP C4-2B (prostate carcinoma) -3.44 1.45 1.000.05 2.00
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  urinary albumin-to-creatinine ratio,  years of education
GTEx eQTL Artery_Tibial,  Brain_Cerebellum,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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