rs4783896 chr16:55572448 A>G
- Sequence
agtggaaaaagctaattgcagaag[A/G]aatgtatctatgttgagcaataaa
- ASB in cell types
- Aska-SS (Biphasic synovial sarcoma)
- ASB for transcription factors
- SMRC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMRC1_HUMAN | -1.94 | 2.89 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Esophagus_Mucosa, Nerve_Tibial, Pituitary, Prostate, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood