rs4784732 chr16:56860607 G>C
- Sequence
tgcttctctggggtttccgcatct[G/C]tggtttcctgacggctgaaagttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- RUNX3_HUMAN STAG1_HUMAN ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RUNX3_HUMAN | 2.99 | -2.65 | 1.00 | -3.73 | Concordant | |||
| STAG1_HUMAN | 1.35 | 0.02 | 1.22 | n/a | n/a | |||
| ELF1_HUMAN | 1.65 | -1.65 | 1.00 | n/a | No Hit |
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Motif analysis
