rs4787423 chr16:27356013 C>T

Sequence
gcagtcctctcagtcaataatacg[C/T]atttactgagcagctactacacac
ASB in cell types
GM12891 (male B- cells lymphoblastoid cell line)
ASB for transcription factors
STAG1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.75 1.48 0.970.02 1.00 n/a n/a
CTCF_HUMAN 0.71 0.87 1.000.04 1.13 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence infant head circumference

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