rs4787427 chr16:27375073 C>G

Sequence
gcccctccctaccactcttccgga[C/G]gaacccggctatcctgcctgccct
ASB in cell types
K562 (myelogenous leukemia) MOLT-4 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
GABP1_HUMAN COT1_HUMAN FOXK2_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GABP1_HUMAN n/a 2.38 1.003.5·10-3 2.00 n/a n/a
COT1_HUMAN 2.38 -0.69 5.4·10-31.00 1.50 n/a No Hit
FOXK2_HUMAN -0.57 2.48 1.000.02 1.67 n/a No Hit
IKZF2_HUMAN -0.47 0.71 1.000.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight total serum ige

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