rs4788029 chr16:27995565 A>G
- Sequence
tcagaaagatcttgtttaaagacc[A/G]cagggacacacttctatccccttt
- ASB in cell types
- K562 (myelogenous leukemia) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- ERR1_HUMAN HES1_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERR1_HUMAN | n/a | 3.05 | 2.00 | 0.24 | Weak Concordant | |||
| HES1_HUMAN | n/a | 2.17 | 2.00 | n/a | No Hit | |||
| SMCA4_HUMAN | -0.61 | 1.40 | 1.00 | n/a | n/a |
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Motif analysis
