rs4788042 chr16:28082715 T>A
- Sequence
gcagttcatgctccggtggcagag[T/A]tgagcattcgagacagagacaacg
- ASB in cell types
- K562 (myelogenous leukemia) foreskin keratinocyte
- ASB for transcription factors
- TAL1_HUMAN MTG16_HUMAN HTF4_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | n/a | 2.61 | 2.00 | 4.18 | Concordant | |||
| MTG16_HUMAN | n/a | 1.56 | 2.00 | n/a | n/a | |||
| HTF4_HUMAN | -2.06 | 2.46 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 2.05 | 0.08 | 1.00 | n/a | No Hit |
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Motif analysis
