rs4788689 chr16:73015931 C>G

Sequence
caggactgggttttacacaccata[C/G]gggcactggccatgttgacccagt
ASB in cell types
breast tumor 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.43 -1.40 4.6·10-41.00 2.33 n/a No Hit
ESR1_HUMAN 1.89 -1.18 4.7·10-41.00 2.00 2.58 Discordant
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Motif analysis

ESR1_HUMAN Discordant
ESR1_HUMAN pic

Genetic associations

GRASP adiponectin levels,  bipolar disorder,  ldl cholesterol,  lp-pla2 mass,  panic disorder,  urinary albumin-to-creatinine ratio

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