rs4789096 chr17:74776559 G>C
- Sequence
ggaccggcgggagacggcggcttg[G/C]gagctggctgtgctgcaggtgttg
- ASB in cell types
- K562 (myelogenous leukemia) keratinocytes COLO-320 (colon adenocarcinoma)
- ASB for transcription factors
- SNAI2_HUMAN RBM25_HUMAN RFOX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | -4.37 | 2.57 | 1.50 | n/a | No Hit | |||
| RBM25_HUMAN | 0.92 | 2.17 | 3.00 | n/a | n/a | |||
| RFOX2_HUMAN | 0.45 | 1.98 | 2.25 | n/a | n/a |
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