rs4789143 chr17:75132055 A>G

Sequence
gggcccaacaaagggatgctctga[A/G]atactgggaagcatctaacgagga
ASB in cell types
primary B-CLL cells 22RV1 (prostate carcinoma)
ASB for transcription factors
BRD4_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 1.80 0.36 2.6·10-31.00 1.50 n/a n/a
ANDR_HUMAN 2.21 -0.91 0.021.00 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  bipolar disorder,  college completion,  height,  years of education
GTEx eQTL Artery_Tibial,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Nerve_Tibial,  Testis,  Thyroid

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